Carnation DB

Dca44076.1

Annotation

8-exons
f-1
sp|B9RT82_RICCO#Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0681970#GO:0048037;GO:0043754;GO:0046949#2F1P0C
Repeat List (scaffold504)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44076.1	4	502	502	59.56	499	58	8e-166
Target_name	Start	End	Length	Cov(%)
sp\|B9RT82_RICCO	1	504	504	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44076.1	76	502	502	53.78	427	63	9e-155
Target_name	Start	End	Length	Cov(%)
AT3G06850.1	62	483	483	87.37

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold504	Augus-PASA	mRNA	14080	22426	.	+	.	ID=Dca44076.1;Parent=Dca44076
scaffold504	Augus-PASA	exon	14080	14271	.	+	.	ID=Dca44076.1.exon1;Parent=Dca44076.1
scaffold504	Augus-PASA	exon	15338	15484	.	+	.	ID=Dca44076.1.exon2;Parent=Dca44076.1
scaffold504	Augus-PASA	exon	16807	16932	.	+	.	ID=Dca44076.1.exon3;Parent=Dca44076.1
scaffold504	Augus-PASA	exon	17555	17919	.	+	.	ID=Dca44076.1.exon4;Parent=Dca44076.1
scaffold504	Augus-PASA	exon	19191	19438	.	+	.	ID=Dca44076.1.exon5;Parent=Dca44076.1
scaffold504	Augus-PASA	exon	20350	20438	.	+	.	ID=Dca44076.1.exon6;Parent=Dca44076.1
scaffold504	Augus-PASA	exon	21207	21434	.	+	.	ID=Dca44076.1.exon7;Parent=Dca44076.1
scaffold504	Augus-PASA	exon	22313	22426	.	+	.	ID=Dca44076.1.exon8;Parent=Dca44076.1