Dca44248.1
Annotation
- 4-exons
- f-1
- sp|Q7G3C6_ORYSJ#Transposon protein, putative, CACTA, En/Spm sub-class#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os10g21980#unknown#0F0P0C
- Repeat List (scaffold5079)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44248.1 |
20 |
772 |
888 |
38.4 |
753 |
42 |
7e-175
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q7G3C6_ORYSJ |
138 |
942 |
1647 |
48.87 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44248.1 |
6 |
632 |
888 |
28.94 |
627 |
38 |
1e-119
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0208400-02 |
123 |
788 |
829 |
80.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5079 |
Augustus |
mRNA |
5835 |
9001 |
. |
- |
. |
ID=Dca44248.1;Parent=Dca44248 |
| scaffold5079 |
Augustus |
exon |
5835 |
6190 |
. |
- |
. |
ID=Dca44248.1.exon1;Parent=Dca44248.1 |
| scaffold5079 |
Augustus |
exon |
6437 |
6648 |
. |
- |
. |
ID=Dca44248.1.exon2;Parent=Dca44248.1 |
| scaffold5079 |
Augustus |
exon |
6755 |
7640 |
. |
- |
. |
ID=Dca44248.1.exon3;Parent=Dca44248.1 |
| scaffold5079 |
Augustus |
exon |
7789 |
9001 |
. |
- |
. |
ID=Dca44248.1.exon4;Parent=Dca44248.1 |
