Carnation DB

Dca44252.1

Annotation

6-exons
f-1
sp|F6HFU6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g00450#GO:0016020#0F0P1C
sp|B9HIE8_POPTR#Magnesium transporter#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_564302#GO:0016020#0F0P1C
Repeat List (scaffold508)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44252.1	11	420	421	66.98	410	68	8e-160
Target_name	Start	End	Length	Cov(%)
sp\|F6HFU6_VITVI	14	420	421	96.67

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44252.1	14	421	421	62.7	408	64	7e-135
Target_name	Start	End	Length	Cov(%)
AT2G03620.1	27	421	421	93.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold508	Augustus	mRNA	48678	50829	.	-	.	ID=Dca44252.1;Parent=Dca44252
scaffold508	Augustus	exon	48678	48908	.	-	.	ID=Dca44252.1.exon1;Parent=Dca44252.1
scaffold508	Augustus	exon	48997	49044	.	-	.	ID=Dca44252.1.exon2;Parent=Dca44252.1
scaffold508	Augustus	exon	49145	49516	.	-	.	ID=Dca44252.1.exon3;Parent=Dca44252.1
scaffold508	Augustus	exon	49646	49774	.	-	.	ID=Dca44252.1.exon4;Parent=Dca44252.1
scaffold508	Augustus	exon	50206	50276	.	-	.	ID=Dca44252.1.exon5;Parent=Dca44252.1
scaffold508	Augustus	exon	50415	50829	.	-	.	ID=Dca44252.1.exon6;Parent=Dca44252.1