Carnation DB

Dca4429.1

Annotation

6-exons
f-1
sp|E7EC33_SOLTU#Gamma-tocopherol methyltransferase#Solanum tuberosum (Potato)#Name=gamma-TMT#GO:0008168#1F0P0C
Repeat List (scaffold1166)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4429.1	5	295	295	78.64	291	80	3e-141
Target_name	Start	End	Length	Cov(%)
sp\|E7EC33_SOLTU	78	368	368	79.07

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4429.1	10	295	295	74.91	286	78	1e-135
Target_name	Start	End	Length	Cov(%)
Os02t0701600-01	74	359	363	78.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1166	Augustus	mRNA	92061	96208	.	+	.	ID=Dca4429.1;Parent=Dca4429
scaffold1166	Augustus	exon	92061	92262	.	+	.	ID=Dca4429.1.exon1;Parent=Dca4429.1
scaffold1166	Augus-PASA	exon	94896	95065	.	+	.	ID=Dca4429.1.exon2;Parent=Dca4429.1
scaffold1166	Augus-PASA	exon	95398	95502	.	+	.	ID=Dca4429.1.exon3;Parent=Dca4429.1
scaffold1166	Augus-PASA	exon	95611	95814	.	+	.	ID=Dca4429.1.exon4;Parent=Dca4429.1
scaffold1166	Augustus	exon	95901	96003	.	+	.	ID=Dca4429.1.exon5;Parent=Dca4429.1
scaffold1166	Augustus	exon	96105	96208	.	+	.	ID=Dca4429.1.exon6;Parent=Dca4429.1