Carnation DB

Dca4431.1

Annotation

6-exons
f-1
sp|B9N6T5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_796960#unknown#0F0P0C
AT1G20030.2 | Symbols: | Pathogenesis-related thaumatin superfamily protein | chr1:6945725-6947017 FORWARD LENGTH=316
Repeat List (scaffold1166)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4431.1	194	344	572	16.08	151	59	9e-49
Target_name	Start	End	Length	Cov(%)
sp\|B9N6T5_POPTR	10	165	234	66.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4431.1	196	342	572	13.98	147	53	7e-40
Target_name	Start	End	Length	Cov(%)
AT1G20030.2	19	171	316	48.41

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1166	Augustus	mRNA	110132	116193	.	+	.	ID=Dca4431.1;Parent=Dca4431
scaffold1166	Augustus	exon	110132	110189	.	+	.	ID=Dca4431.1.exon1;Parent=Dca4431.1
scaffold1166	Augustus	exon	110653	111021	.	+	.	ID=Dca4431.1.exon2;Parent=Dca4431.1
scaffold1166	Augustus	exon	111215	111364	.	+	.	ID=Dca4431.1.exon3;Parent=Dca4431.1
scaffold1166	Augustus	exon	114753	115124	.	+	.	ID=Dca4431.1.exon4;Parent=Dca4431.1
scaffold1166	Augustus	exon	115291	115764	.	+	.	ID=Dca4431.1.exon5;Parent=Dca4431.1
scaffold1166	Augustus	exon	115898	116193	.	+	.	ID=Dca4431.1.exon6;Parent=Dca4431.1