Carnation DB

Dca44315.1

Annotation

6-exons
f-1
sp|D7TQQ3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g01400#unknown#0F0P0C
AT5G52970.1 | Symbols: | thylakoid lumen 15.0 kDa protein | chr5:21479620-21481018 FORWARD LENGTH=223
Repeat List (scaffold5092)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44315.1	1	187	187	79.67	187	80	2e-84
Target_name	Start	End	Length	Cov(%)
sp\|D7TQQ3_VITVI	33	220	220	85.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44315.1	6	187	187	76.47	182	79	8e-81
Target_name	Start	End	Length	Cov(%)
AT5G52970.1	43	223	223	81.16

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5092	Augus-PASA	mRNA	9226	12727	.	+	.	ID=Dca44315.1;Parent=Dca44315
scaffold5092	Augus-PASA	exon	9226	9322	.	+	.	ID=Dca44315.1.exon1;Parent=Dca44315.1
scaffold5092	Augus-PASA	exon	10011	10114	.	+	.	ID=Dca44315.1.exon2;Parent=Dca44315.1
scaffold5092	Augus-PASA	exon	11609	11699	.	+	.	ID=Dca44315.1.exon3;Parent=Dca44315.1
scaffold5092	Augus-PASA	exon	12116	12184	.	+	.	ID=Dca44315.1.exon4;Parent=Dca44315.1
scaffold5092	Augus-PASA	exon	12271	12380	.	+	.	ID=Dca44315.1.exon5;Parent=Dca44315.1
scaffold5092	Augus-PASA	exon	12635	12727	.	+	.	ID=Dca44315.1.exon6;Parent=Dca44315.1