Carnation DB

Dca44365.1

Annotation

19-exons
f-1
sp|A5BH78_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_000953#GO:0016021;GO:0005874;GO:0005524;GO:0003777;GO:0007018#2F1P2C
AT5G41310.1 | Symbols: | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain | chr5:16516634-16522392 REVERSE LENGTH=961
Repeat List (scaffold51)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44365.1	10	912	957	55.79	903	54	0
Target_name	Start	End	Length	Cov(%)
sp\|A5BH78_VITVI	36	992	1742	54.93

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44365.1	10	945	957	48.9	936	47	0
Target_name	Start	End	Length	Cov(%)
AT5G41310.1	46	956	961	94.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold51	Augus-PASA	mRNA	320664	328413	.	-	.	ID=Dca44365.1;Parent=Dca44365
scaffold51	Augus-PASA	exon	320664	320746	.	-	.	ID=Dca44365.1.exon1;Parent=Dca44365.1
scaffold51	Augus-PASA	exon	321245	321342	.	-	.	ID=Dca44365.1.exon2;Parent=Dca44365.1
scaffold51	Augus-PASA	exon	321696	322195	.	-	.	ID=Dca44365.1.exon3;Parent=Dca44365.1
scaffold51	Augus-PASA	exon	322647	322810	.	-	.	ID=Dca44365.1.exon4;Parent=Dca44365.1
scaffold51	Augustus	exon	323071	323338	.	-	.	ID=Dca44365.1.exon5;Parent=Dca44365.1
scaffold51	Augustus	exon	324274	324378	.	-	.	ID=Dca44365.1.exon6;Parent=Dca44365.1
scaffold51	Augustus	exon	324477	324583	.	-	.	ID=Dca44365.1.exon7;Parent=Dca44365.1
scaffold51	Augustus	exon	324673	324852	.	-	.	ID=Dca44365.1.exon8;Parent=Dca44365.1
scaffold51	Augustus	exon	324952	325047	.	-	.	ID=Dca44365.1.exon9;Parent=Dca44365.1
scaffold51	Augustus	exon	325120	325201	.	-	.	ID=Dca44365.1.exon10;Parent=Dca44365.1
scaffold51	Augustus	exon	325309	325650	.	-	.	ID=Dca44365.1.exon11;Parent=Dca44365.1
scaffold51	Augus-PASA	exon	326291	326320	.	-	.	ID=Dca44365.1.exon12;Parent=Dca44365.1
scaffold51	Augus-PASA	exon	326406	326498	.	-	.	ID=Dca44365.1.exon13;Parent=Dca44365.1
scaffold51	Augus-PASA	exon	326569	326646	.	-	.	ID=Dca44365.1.exon14;Parent=Dca44365.1
scaffold51	Augustus	exon	326758	326841	.	-	.	ID=Dca44365.1.exon15;Parent=Dca44365.1
scaffold51	Augustus	exon	326940	326995	.	-	.	ID=Dca44365.1.exon16;Parent=Dca44365.1
scaffold51	Augustus	exon	327547	327787	.	-	.	ID=Dca44365.1.exon17;Parent=Dca44365.1
scaffold51	Augustus	exon	327976	328074	.	-	.	ID=Dca44365.1.exon18;Parent=Dca44365.1
scaffold51	Augustus	exon	328246	328413	.	-	.	ID=Dca44365.1.exon19;Parent=Dca44365.1