Dca44449.1
Annotation
- 3-exons
- f-1
- sp|B2BXI1_ARALL#Gag-pol polymerase#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#Name=GagPol2#unknown#0F0P0C
- Repeat List (scaffold5115)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44449.1 |
98 |
326 |
328 |
24.08 |
229 |
34 |
1e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B2BXI1_ARALL |
413 |
645 |
672 |
34.67 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44449.1 |
194 |
325 |
328 |
14.32 |
132 |
35 |
7e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0439900-01 |
162 |
297 |
421 |
32.3 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5115 |
Augustus |
mRNA |
21206 |
24351 |
. |
- |
. |
ID=Dca44449.1;Parent=Dca44449 |
| scaffold5115 |
Augustus |
exon |
21206 |
21902 |
. |
- |
. |
ID=Dca44449.1.exon1;Parent=Dca44449.1 |
| scaffold5115 |
Augustus |
exon |
23849 |
24035 |
. |
- |
. |
ID=Dca44449.1.exon2;Parent=Dca44449.1 |
| scaffold5115 |
Augustus |
exon |
24249 |
24351 |
. |
- |
. |
ID=Dca44449.1.exon3;Parent=Dca44449.1 |
