Dca44595.1
Annotation
- 2-exons
- f-1
- sp|O22148_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g45230#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- Repeat List (scaffold5140)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44595.1 |
5 |
377 |
462 |
33.11 |
373 |
41 |
8e-83
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O22148_ARATH |
571 |
940 |
1374 |
26.92 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44595.1 |
8 |
324 |
462 |
24.67 |
317 |
35 |
4e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
493 |
813 |
857 |
37.45 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5140 |
Augustus |
mRNA |
6054 |
8220 |
. |
- |
. |
ID=Dca44595.1;Parent=Dca44595 |
| scaffold5140 |
Augustus |
exon |
6054 |
6307 |
. |
- |
. |
ID=Dca44595.1.exon1;Parent=Dca44595.1 |
| scaffold5140 |
Augustus |
exon |
7086 |
8220 |
. |
- |
. |
ID=Dca44595.1.exon2;Parent=Dca44595.1 |
