Carnation DB

Dca44601.1

Annotation

8-exons
f-1
sp|A5BHH4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g05020#GO:0016592;GO:0001104#1F0P1C
AT5G20170.1 | Symbols: | RNA polymerase II transcription mediators | chr5:6807554-6810729 REVERSE LENGTH=653
Repeat List (scaffold5142)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44601.1	7	650	650	59.23	644	59	0
Target_name	Start	End	Length	Cov(%)
sp\|A5BHH4_VITVI	5	660	660	99.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44601.1	5	649	650	51.84	645	51	0
Target_name	Start	End	Length	Cov(%)
AT5G20170.1	3	648	653	98.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5142	Augus-PASA	mRNA	18086	23330	.	-	.	ID=Dca44601.1;Parent=Dca44601
scaffold5142	Augus-PASA	exon	18086	18412	.	-	.	ID=Dca44601.1.exon1;Parent=Dca44601.1
scaffold5142	Augus-PASA	exon	18751	19062	.	-	.	ID=Dca44601.1.exon2;Parent=Dca44601.1
scaffold5142	Augustus	exon	19156	19599	.	-	.	ID=Dca44601.1.exon3;Parent=Dca44601.1
scaffold5142	Augustus	exon	19695	20079	.	-	.	ID=Dca44601.1.exon4;Parent=Dca44601.1
scaffold5142	Augustus	exon	20684	20769	.	-	.	ID=Dca44601.1.exon5;Parent=Dca44601.1
scaffold5142	Augustus	exon	20878	20991	.	-	.	ID=Dca44601.1.exon6;Parent=Dca44601.1
scaffold5142	Augustus	exon	21416	21605	.	-	.	ID=Dca44601.1.exon7;Parent=Dca44601.1
scaffold5142	Augustus	exon	23236	23330	.	-	.	ID=Dca44601.1.exon8;Parent=Dca44601.1