Carnation DB

Dca44620.1

Annotation

8-exons
f-1
sp|F6GX62_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0219g00120#unknown#0F0P0C
AT5G40670.1 | Symbols: | PQ-loop repeat family protein / transmembrane family protein | chr5:16285968-16287591 FORWARD LENGTH=270
Repeat List (scaffold5147)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44620.1	4	270	276	74.63	267	78	4e-119
Target_name	Start	End	Length	Cov(%)
sp\|F6GX62_VITVI	3	268	291	91.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44620.1	5	270	276	68.84	266	72	3e-110
Target_name	Start	End	Length	Cov(%)
AT5G40670.1	4	268	270	98.14

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5147	Augustus	mRNA	4324	8788	.	-	.	ID=Dca44620.1;Parent=Dca44620
scaffold5147	Augustus	exon	4324	4473	.	-	.	ID=Dca44620.1.exon1;Parent=Dca44620.1
scaffold5147	Augustus	exon	4572	4621	.	-	.	ID=Dca44620.1.exon2;Parent=Dca44620.1
scaffold5147	Augustus	exon	4709	4826	.	-	.	ID=Dca44620.1.exon3;Parent=Dca44620.1
scaffold5147	Augustus	exon	5572	5614	.	-	.	ID=Dca44620.1.exon4;Parent=Dca44620.1
scaffold5147	Augustus	exon	6442	6566	.	-	.	ID=Dca44620.1.exon5;Parent=Dca44620.1
scaffold5147	Augustus	exon	6701	6790	.	-	.	ID=Dca44620.1.exon6;Parent=Dca44620.1
scaffold5147	Augustus	exon	7360	7492	.	-	.	ID=Dca44620.1.exon7;Parent=Dca44620.1
scaffold5147	Augustus	exon	8667	8788	.	-	.	ID=Dca44620.1.exon8;Parent=Dca44620.1