Dca44821.1
Annotation
- 2-exons
- f-1
- sp|Q10HF0_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os03g39400#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5194)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44821.1 |
1 |
347 |
347 |
48.99 |
347 |
49 |
4e-88
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q10HF0_ORYSJ |
411 |
756 |
1073 |
32.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44821.1 |
14 |
275 |
347 |
23.34 |
262 |
30 |
4e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
389 |
653 |
1428 |
18.55 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5194 |
Augustus |
mRNA |
7499 |
8894 |
. |
+ |
. |
ID=Dca44821.1;Parent=Dca44821 |
| scaffold5194 |
Augustus |
exon |
7499 |
8255 |
. |
+ |
. |
ID=Dca44821.1.exon1;Parent=Dca44821.1 |
| scaffold5194 |
Augustus |
exon |
8608 |
8894 |
. |
+ |
. |
ID=Dca44821.1.exon2;Parent=Dca44821.1 |
