Carnation DB

Dca44822.1

Annotation

6-exons
f-1
sp|A2Y7S3_ORYSI#Putative uncharacterized protein#Oryza sativa subsp indica (Rice)#ORFNames=OsI_21092#GO:0003676;GO:0008270#2F0P0C
sp|Q7XE42_ORYSJ#Transposon protein, putative, Mutator sub-class#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os10g30240#GO:0003676;GO:0008270#2F0P0C
Repeat List (scaffold5194)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44822.1	441	1118	1227	19.31	678	35	9e-114
Target_name	Start	End	Length	Cov(%)
sp\|A2Y7S3_ORYSI	194	868	1005	67.16

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44822.1	501	1107	1227	15.48	607	31	1e-84
Target_name	Start	End	Length	Cov(%)
Os06t0704400-02	88	686	805	74.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5194	Augustus	mRNA	13106	21808	.	+	.	ID=Dca44822.1;Parent=Dca44822
scaffold5194	Augustus	exon	13106	13350	.	+	.	ID=Dca44822.1.exon1;Parent=Dca44822.1
scaffold5194	Augustus	exon	14786	14837	.	+	.	ID=Dca44822.1.exon2;Parent=Dca44822.1
scaffold5194	Augustus	exon	16427	16564	.	+	.	ID=Dca44822.1.exon3;Parent=Dca44822.1
scaffold5194	Augustus	exon	18135	20117	.	+	.	ID=Dca44822.1.exon4;Parent=Dca44822.1
scaffold5194	Augustus	exon	20408	21526	.	+	.	ID=Dca44822.1.exon5;Parent=Dca44822.1
scaffold5194	Augustus	exon	21662	21808	.	+	.	ID=Dca44822.1.exon6;Parent=Dca44822.1