Dca44823.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5195)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44823.1 |
1 |
153 |
153 |
65.35 |
153 |
49 |
5e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
669 |
875 |
896 |
23.1 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44823.1 |
51 |
153 |
153 |
24.83 |
103 |
37 |
2e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1275 |
1375 |
1401 |
7.2 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5195 |
Augustus |
mRNA |
5575 |
6198 |
. |
+ |
. |
ID=Dca44823.1;Parent=Dca44823 |
| scaffold5195 |
Augustus |
exon |
5575 |
5726 |
. |
+ |
. |
ID=Dca44823.1.exon1;Parent=Dca44823.1 |
| scaffold5195 |
Augustus |
exon |
5889 |
6198 |
. |
+ |
. |
ID=Dca44823.1.exon2;Parent=Dca44823.1 |
