Carnation DB

Dca44849.1

Annotation

10-exons
f-1
sp|B9N3R0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_744076#unknown#0F0P0C
AT4G22540.1 | Symbols: ORP2A | OSBP(oxysterol binding protein)-related protein 2A | chr4:11860969-11866108 REVERSE LENGTH=721
Repeat List (scaffold52)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44849.1	1	733	733	63.43	733	61	0
Target_name	Start	End	Length	Cov(%)
sp\|B9N3R0_POPTR	6	736	737	99.18

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44849.1	1	727	733	61.39	727	61	0
Target_name	Start	End	Length	Cov(%)
AT4G22540.1	6	717	721	98.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold52	Augustus	mRNA	163584	170315	.	+	.	ID=Dca44849.1;Parent=Dca44849
scaffold52	Augustus	exon	163584	163970	.	+	.	ID=Dca44849.1.exon1;Parent=Dca44849.1
scaffold52	Augustus	exon	167232	167540	.	+	.	ID=Dca44849.1.exon2;Parent=Dca44849.1
scaffold52	Augustus	exon	167700	167778	.	+	.	ID=Dca44849.1.exon3;Parent=Dca44849.1
scaffold52	Augustus	exon	168087	168523	.	+	.	ID=Dca44849.1.exon4;Parent=Dca44849.1
scaffold52	Augustus	exon	168651	168806	.	+	.	ID=Dca44849.1.exon5;Parent=Dca44849.1
scaffold52	Augustus	exon	168898	169065	.	+	.	ID=Dca44849.1.exon6;Parent=Dca44849.1
scaffold52	Augustus	exon	169162	169302	.	+	.	ID=Dca44849.1.exon7;Parent=Dca44849.1
scaffold52	Augustus	exon	169427	169660	.	+	.	ID=Dca44849.1.exon8;Parent=Dca44849.1
scaffold52	Augustus	exon	169774	169887	.	+	.	ID=Dca44849.1.exon9;Parent=Dca44849.1
scaffold52	Augustus	exon	170139	170315	.	+	.	ID=Dca44849.1.exon10;Parent=Dca44849.1