Carnation DB

Dca44863.1

Annotation

6-exons
f-1
sp|F6HH79_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g05090#GO:0005524;GO:0008026;GO:0003676#3F0P0C
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:17705382-17708744 FORWARD LENGTH=633
Repeat List (scaffold52)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44863.1	102	667	667	50.82	566	60	1e-173
Target_name	Start	End	Length	Cov(%)
sp\|F6HH79_VITVI	92	613	613	85.15

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44863.1	142	566	667	43.47	425	68	8e-167
Target_name	Start	End	Length	Cov(%)
AT2G42520.1	144	560	633	65.87

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold52	Augus-PASA	mRNA	361076	365464	.	+	.	ID=Dca44863.1;Parent=Dca44863
scaffold52	Augus-PASA	exon	361076	361843	.	+	.	ID=Dca44863.1.exon1;Parent=Dca44863.1
scaffold52	Augus-PASA	exon	362494	362577	.	+	.	ID=Dca44863.1.exon2;Parent=Dca44863.1
scaffold52	Augus-PASA	exon	363244	363486	.	+	.	ID=Dca44863.1.exon3;Parent=Dca44863.1
scaffold52	Augus-PASA	exon	364320	364484	.	+	.	ID=Dca44863.1.exon4;Parent=Dca44863.1
scaffold52	Augus-PASA	exon	364587	364700	.	+	.	ID=Dca44863.1.exon5;Parent=Dca44863.1
scaffold52	Augus-PASA	exon	364835	365464	.	+	.	ID=Dca44863.1.exon6;Parent=Dca44863.1