Carnation DB

Dca44889.1

Annotation

5-exons
f-1
sp|D7U040_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0002g02590#unknown#0F0P0C
Repeat List (scaffold5205)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44889.1	140	241	241	25.31	102	60	7e-31
Target_name	Start	End	Length	Cov(%)
sp\|D7U040_VITVI	251	352	660	15.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44889.1	12	130	241	26.97	119	55	1e-28
Target_name	Start	End	Length	Cov(%)
AT1G73020.1	7	121	665	17.29

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5205	Augustus	mRNA	23516	28168	.	-	.	ID=Dca44889.1;Parent=Dca44889
scaffold5205	Augustus	exon	23516	23789	.	-	.	ID=Dca44889.1.exon1;Parent=Dca44889.1
scaffold5205	Augustus	exon	23913	23947	.	-	.	ID=Dca44889.1.exon2;Parent=Dca44889.1
scaffold5205	Augustus	exon	25077	25225	.	-	.	ID=Dca44889.1.exon3;Parent=Dca44889.1
scaffold5205	Augustus	exon	25505	25574	.	-	.	ID=Dca44889.1.exon4;Parent=Dca44889.1
scaffold5205	Augustus	exon	27971	28168	.	-	.	ID=Dca44889.1.exon5;Parent=Dca44889.1