Carnation DB

Dca44895.1

Annotation

9-exons
f-1
sp|B9S1R3_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0867430#unknown#0F0P0C
sp|G7K412_MEDTR#F-box protein SKIP31#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_5g025560#unknown#0F0P0C
Repeat List (scaffold5208)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44895.1	1	334	334	63.47	334	64	4e-119
Target_name	Start	End	Length	Cov(%)
sp\|B9S1R3_RICCO	1	316	316	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44895.1	11	334	334	55.08	324	55	7e-94
Target_name	Start	End	Length	Cov(%)
Os06t0709100-01	46	375	376	87.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5208	Augus-PASA	mRNA	15299	18806	.	+	.	ID=Dca44895.1;Parent=Dca44895
scaffold5208	Augus-PASA	exon	15299	15376	.	+	.	ID=Dca44895.1.exon1;Parent=Dca44895.1
scaffold5208	Augus-PASA	exon	16433	16669	.	+	.	ID=Dca44895.1.exon2;Parent=Dca44895.1
scaffold5208	Augus-PASA	exon	16765	16838	.	+	.	ID=Dca44895.1.exon3;Parent=Dca44895.1
scaffold5208	Augus-PASA	exon	17306	17381	.	+	.	ID=Dca44895.1.exon4;Parent=Dca44895.1
scaffold5208	Augus-PASA	exon	17540	17650	.	+	.	ID=Dca44895.1.exon5;Parent=Dca44895.1
scaffold5208	Augus-PASA	exon	17774	17948	.	+	.	ID=Dca44895.1.exon6;Parent=Dca44895.1
scaffold5208	Augus-PASA	exon	18058	18176	.	+	.	ID=Dca44895.1.exon7;Parent=Dca44895.1
scaffold5208	Augus-PASA	exon	18259	18322	.	+	.	ID=Dca44895.1.exon8;Parent=Dca44895.1
scaffold5208	Augus-PASA	exon	18736	18806	.	+	.	ID=Dca44895.1.exon9;Parent=Dca44895.1