Dca45023.1
Annotation
- 2-exons
- f-1
- sp|Q850U9_ORYSJ#Putative gag-pol polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0037J17.27#GO:0003676#1F0P0C
- Repeat List (scaffold5237)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45023.1 |
1 |
197 |
199 |
55.27 |
197 |
46 |
4e-52
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q850U9_ORYSJ |
308 |
547 |
547 |
43.87 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45023.1 |
76 |
182 |
199 |
20.6 |
107 |
36 |
2e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1270 |
1382 |
1401 |
8.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5237 |
Augustus |
mRNA |
7052 |
7938 |
. |
- |
. |
ID=Dca45023.1;Parent=Dca45023 |
| scaffold5237 |
Augustus |
exon |
7052 |
7410 |
. |
- |
. |
ID=Dca45023.1.exon1;Parent=Dca45023.1 |
| scaffold5237 |
Augustus |
exon |
7698 |
7938 |
. |
- |
. |
ID=Dca45023.1.exon2;Parent=Dca45023.1 |
