Dca4509.1
Annotation
- 4-exons
- f-1
- sp|A5BKB9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_003621#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- sp|B5U9F7_SOYBN#Gag-protease-integrase-RT-RNaseH polyprotein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0003676;GO:0008233;GO:0008270;GO:0015074;GO:0006508#3F2P0C
- Repeat List (scaffold117)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
Dca4509.1 |
2 |
70 |
316 |
17.08 |
69 |
79 |
4e-26
|
Target_name |
Start |
End |
Length |
Cov(%) |
sp|A5BKB9_VITVI |
518 |
586 |
1180 |
5.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
Dca4509.1 |
3 |
69 |
316 |
9.49 |
67 |
45 |
3e-08
|
Target_name |
Start |
End |
Length |
Cov(%) |
Os08t0125300-01 |
609 |
666 |
1428 |
4.06 |
Coding region
seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
scaffold117 |
Augustus |
mRNA |
107752 |
115903 |
. |
+ |
. |
ID=Dca4509.1;Parent=Dca4509 |
scaffold117 |
Augustus |
exon |
107752 |
107964 |
. |
+ |
. |
ID=Dca4509.1.exon1;Parent=Dca4509.1 |
scaffold117 |
Augustus |
exon |
108259 |
108527 |
. |
+ |
. |
ID=Dca4509.1.exon2;Parent=Dca4509.1 |
scaffold117 |
Augustus |
exon |
115198 |
115396 |
. |
+ |
. |
ID=Dca4509.1.exon3;Parent=Dca4509.1 |
scaffold117 |
Augustus |
exon |
115634 |
115903 |
. |
+ |
. |
ID=Dca4509.1.exon4;Parent=Dca4509.1 |