Carnation DB

Dca45161.1

Annotation

5-exons
f-1
sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os06t0484800-00 Reverse transcriptase domain containing protein.
Repeat List (scaffold527)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45161.1	62	755	981	25.48	694	34	5e-125
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG3_BETVU	23	761	1114	66.33

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45161.1	134	755	981	19.97	622	30	4e-74
Target_name	Start	End	Length	Cov(%)
Os06t0484800-00	18	671	857	76.31

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold527	Augustus	mRNA	11701	15284	.	-	.	ID=Dca45161.1;Parent=Dca45161
scaffold527	Augustus	exon	11701	12074	.	-	.	ID=Dca45161.1.exon1;Parent=Dca45161.1
scaffold527	Augustus	exon	12214	12520	.	-	.	ID=Dca45161.1.exon2;Parent=Dca45161.1
scaffold527	Augustus	exon	12746	13729	.	-	.	ID=Dca45161.1.exon3;Parent=Dca45161.1
scaffold527	Augustus	exon	13859	14947	.	-	.	ID=Dca45161.1.exon4;Parent=Dca45161.1
scaffold527	Augustus	exon	15093	15284	.	-	.	ID=Dca45161.1.exon5;Parent=Dca45161.1