Carnation DB

Dca4527.1

Annotation

7-exons
f-1
sp|B9MSY5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_589279#unknown#0F0P0C
AT5G45550.1 | Symbols: | Mob1/phocein family protein | chr5:18462284-18464840 FORWARD LENGTH=215
Repeat List (scaffold117)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4527.1	1	213	214	94.85	213	96	5e-119
Target_name	Start	End	Length	Cov(%)
sp\|B9MSY5_POPTR	1	213	215	99.06

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4527.1	1	213	214	90.18	213	91	8e-114
Target_name	Start	End	Length	Cov(%)
AT5G45550.1	1	212	215	98.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold117	Augus-PASA	mRNA	235895	239171	.	-	.	ID=Dca4527.1;Parent=Dca4527
scaffold117	Augus-PASA	exon	235895	235963	.	-	.	ID=Dca4527.1.exon1;Parent=Dca4527.1
scaffold117	Augus-PASA	exon	236645	236808	.	-	.	ID=Dca4527.1.exon2;Parent=Dca4527.1
scaffold117	Augus-PASA	exon	236960	237093	.	-	.	ID=Dca4527.1.exon3;Parent=Dca4527.1
scaffold117	Augus-PASA	exon	237317	237410	.	-	.	ID=Dca4527.1.exon4;Parent=Dca4527.1
scaffold117	Augus-PASA	exon	237673	237781	.	-	.	ID=Dca4527.1.exon5;Parent=Dca4527.1
scaffold117	Augus-PASA	exon	237867	237915	.	-	.	ID=Dca4527.1.exon6;Parent=Dca4527.1
scaffold117	Augus-PASA	exon	239146	239171	.	-	.	ID=Dca4527.1.exon7;Parent=Dca4527.1