Dca45466.1
Annotation
- 2-exons
- f-1
- sp|Q9C8F4_ARATH#Ty1/copia-element polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=T15P17.15#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5332)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45466.1 |
12 |
366 |
374 |
33.68 |
355 |
35 |
4e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9C8F4_ARATH |
21 |
376 |
1152 |
30.9 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45466.1 |
13 |
218 |
374 |
18.71 |
206 |
32 |
1e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G21280.1 |
15 |
225 |
237 |
89.02 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5332 |
Augustus |
mRNA |
1630 |
3054 |
. |
- |
. |
ID=Dca45466.1;Parent=Dca45466 |
| scaffold5332 |
Augustus |
exon |
1630 |
1658 |
. |
- |
. |
ID=Dca45466.1.exon1;Parent=Dca45466.1 |
| scaffold5332 |
Augustus |
exon |
1959 |
3054 |
. |
- |
. |
ID=Dca45466.1.exon2;Parent=Dca45466.1 |
