Dca45488.1
Annotation
- 2-exons
- f-3
- sp|B5U9F7_SOYBN#Gag-protease-integrase-RT-RNaseH polyprotein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0003676;GO:0008233;GO:0008270;GO:0015074;GO:0006508#3F2P0C
- Repeat List (scaffold5338)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45488.1 |
50 |
184 |
185 |
51.89 |
135 |
72 |
6e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B5U9F7_SOYBN |
517 |
651 |
1321 |
10.21 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45488.1 |
50 |
178 |
185 |
30.27 |
129 |
44 |
3e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
624 |
744 |
1428 |
8.47 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5338 |
Augustus |
mRNA |
1959 |
5164 |
. |
+ |
. |
ID=Dca45488.1;Parent=Dca45488 |
| scaffold5338 |
Augustus |
exon |
1959 |
2109 |
. |
+ |
. |
ID=Dca45488.1.exon1;Parent=Dca45488.1 |
| scaffold5338 |
Augustus |
exon |
4756 |
5164 |
. |
+ |
. |
ID=Dca45488.1.exon2;Parent=Dca45488.1 |
