Dca45570.1
Annotation
- 3-exons
- f-1
- sp|F6HHB0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g05770#GO:0003824#1F0P0C
- Os06t0172800-00 Similar to alkaline alpha galactosidase 2.
- Repeat List (scaffold536)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45570.1 |
1 |
761 |
761 |
78.05 |
761 |
76 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HHB0_VITVI |
1 |
782 |
782 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45570.1 |
1 |
761 |
761 |
72.27 |
761 |
73 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G20250.4 |
96 |
844 |
844 |
88.74 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold536 |
Augustus |
mRNA |
30047 |
32573 |
. |
+ |
. |
ID=Dca45570.1;Parent=Dca45570 |
| scaffold536 |
Augustus |
exon |
30047 |
31371 |
. |
+ |
. |
ID=Dca45570.1.exon1;Parent=Dca45570.1 |
| scaffold536 |
Augustus |
exon |
31499 |
31843 |
. |
+ |
. |
ID=Dca45570.1.exon2;Parent=Dca45570.1 |
| scaffold536 |
Augus-PASA |
exon |
31958 |
32573 |
. |
+ |
. |
ID=Dca45570.1.exon3;Parent=Dca45570.1 |
