Dca45580.1
Annotation
- 3-exons
- f-1
- sp|B9SMH6_RICCO#Cucumber peeling cupredoxin, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1075160#GO:0005507;GO:0009055#2F0P0C
- Repeat List (scaffold536)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45580.1 |
25 |
126 |
182 |
26.37 |
102 |
48 |
3e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9SMH6_RICCO |
32 |
130 |
190 |
52.1 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45580.1 |
26 |
140 |
182 |
24.72 |
115 |
37 |
3e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G20230.1 |
27 |
147 |
196 |
61.73 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold536 |
Augustus |
mRNA |
100498 |
102198 |
. |
- |
. |
ID=Dca45580.1;Parent=Dca45580 |
| scaffold536 |
Augustus |
exon |
100498 |
100620 |
. |
- |
. |
ID=Dca45580.1.exon1;Parent=Dca45580.1 |
| scaffold536 |
Augustus |
exon |
101459 |
101715 |
. |
- |
. |
ID=Dca45580.1.exon2;Parent=Dca45580.1 |
| scaffold536 |
Augustus |
exon |
102030 |
102198 |
. |
- |
. |
ID=Dca45580.1.exon3;Parent=Dca45580.1 |
