Dca45644.1
Annotation
- 4-exons
- f-1
- sp|Q5R1J2_ORYSJ#Integrase core domain, putative#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g18580#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5376)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45644.1 |
137 |
888 |
892 |
50.67 |
752 |
55 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q5R1J2_ORYSJ |
368 |
1182 |
1184 |
68.83 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45644.1 |
179 |
465 |
892 |
11.88 |
287 |
37 |
2e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
471 |
762 |
1401 |
20.84 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5376 |
Augustus |
mRNA |
12429 |
16533 |
. |
- |
. |
ID=Dca45644.1;Parent=Dca45644 |
| scaffold5376 |
Augustus |
exon |
12429 |
12896 |
. |
- |
. |
ID=Dca45644.1.exon1;Parent=Dca45644.1 |
| scaffold5376 |
Augustus |
exon |
12988 |
13778 |
. |
- |
. |
ID=Dca45644.1.exon2;Parent=Dca45644.1 |
| scaffold5376 |
Augustus |
exon |
14690 |
15649 |
. |
- |
. |
ID=Dca45644.1.exon3;Parent=Dca45644.1 |
| scaffold5376 |
Augustus |
exon |
16074 |
16533 |
. |
- |
. |
ID=Dca45644.1.exon4;Parent=Dca45644.1 |
