Dca45677.1
Annotation
- 4-exons
- f-1
- sp|A5BQR1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_029322#GO:0005622;GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P1C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold5380)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45677.1 |
14 |
107 |
569 |
7.2 |
94 |
33 |
6e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BQR1_VITVI |
632 |
757 |
2155 |
5.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45677.1 |
382 |
567 |
569 |
11.24 |
186 |
34 |
8e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
213 |
394 |
707 |
25.74 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5380 |
Augustus |
mRNA |
32077 |
34184 |
. |
- |
. |
ID=Dca45677.1;Parent=Dca45677 |
| scaffold5380 |
Augustus |
exon |
32077 |
33192 |
. |
- |
. |
ID=Dca45677.1.exon1;Parent=Dca45677.1 |
| scaffold5380 |
Augustus |
exon |
33271 |
33436 |
. |
- |
. |
ID=Dca45677.1.exon2;Parent=Dca45677.1 |
| scaffold5380 |
Augustus |
exon |
33615 |
33884 |
. |
- |
. |
ID=Dca45677.1.exon3;Parent=Dca45677.1 |
| scaffold5380 |
Augustus |
exon |
34027 |
34184 |
. |
- |
. |
ID=Dca45677.1.exon4;Parent=Dca45677.1 |
