Dca45748.1
Annotation
- 2-exons
- f-445
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q0ZCB8_POPTR#Integrase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0003676;GO:0015074;GO:0006355#1F2P0C
- Repeat List (scaffold5397)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45748.1 |
6 |
77 |
82 |
50 |
72 |
57 |
1e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AZ88_VITVI |
733 |
804 |
1048 |
6.87 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45748.1 |
4 |
169 |
217 |
25.8 |
166 |
32 |
2e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1223 |
1382 |
1539 |
10.39 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5397 |
Augustus |
mRNA |
13465 |
14966 |
. |
+ |
. |
ID=Dca45748.1;Parent=Dca45748 |
| scaffold5397 |
Augustus |
exon |
13465 |
13712 |
. |
+ |
. |
ID=Dca45748.1.exon1;Parent=Dca45748.1 |
| scaffold5397 |
Augustus |
exon |
14117 |
14966 |
. |
+ |
. |
ID=Dca45748.1.exon2;Parent=Dca45748.1 |
