Carnation DB

Dca45839.1

Annotation

7-exons
f-1
sp|D7SPX8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0219g00170#GO:0003676;GO:0008270#2F0P0C
sp|B9RAN9_RICCO#Nucleic acid binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1507490#GO:0003676;GO:0008270#2F0P0C
Repeat List (scaffold541)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45839.1	413	513	515	7.37	101	32	2e-07
Target_name	Start	End	Length	Cov(%)
sp\|D7SPX8_VITVI	55	174	417	28.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45839.1	175	253	515	6.01	79	40	9e-08
Target_name	Start	End	Length	Cov(%)
AT3G48440.1	346	420	448	16.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold541	Augustus	mRNA	49366	52701	.	-	.	ID=Dca45839.1;Parent=Dca45839
scaffold541	Augustus	exon	49366	49449	.	-	.	ID=Dca45839.1.exon1;Parent=Dca45839.1
scaffold541	Augustus	exon	49531	49635	.	-	.	ID=Dca45839.1.exon2;Parent=Dca45839.1
scaffold541	Augustus	exon	49740	49970	.	-	.	ID=Dca45839.1.exon3;Parent=Dca45839.1
scaffold541	Augustus	exon	50147	50461	.	-	.	ID=Dca45839.1.exon4;Parent=Dca45839.1
scaffold541	Augustus	exon	50611	50727	.	-	.	ID=Dca45839.1.exon5;Parent=Dca45839.1
scaffold541	Augustus	exon	51871	51945	.	-	.	ID=Dca45839.1.exon6;Parent=Dca45839.1
scaffold541	Augustus	exon	52081	52701	.	-	.	ID=Dca45839.1.exon7;Parent=Dca45839.1