Carnation DB

Dca45903.1

Annotation

7-exons
f-1
sp|D7MV26_ARALL#Autophagy-related protein 3#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_496309#GO:0005737;GO:0006914;GO:0015031#0F2P1C
Repeat List (scaffold5426)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45903.1	1	242	248	77.82	242	80	8e-112
Target_name	Start	End	Length	Cov(%)
sp\|D7MV26_ARALL	1	240	313	76.67

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45903.1	1	242	248	77.41	242	80	5e-112
Target_name	Start	End	Length	Cov(%)
AT5G61500.1	1	240	313	76.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5426	Augustus	mRNA	28916	32489	.	+	.	ID=Dca45903.1;Parent=Dca45903
scaffold5426	Augustus	exon	28916	29076	.	+	.	ID=Dca45903.1.exon1;Parent=Dca45903.1
scaffold5426	Augustus	exon	30018	30088	.	+	.	ID=Dca45903.1.exon2;Parent=Dca45903.1
scaffold5426	Augustus	exon	30185	30301	.	+	.	ID=Dca45903.1.exon3;Parent=Dca45903.1
scaffold5426	Augustus	exon	30746	30915	.	+	.	ID=Dca45903.1.exon4;Parent=Dca45903.1
scaffold5426	Augustus	exon	31360	31445	.	+	.	ID=Dca45903.1.exon5;Parent=Dca45903.1
scaffold5426	Augustus	exon	32088	32139	.	+	.	ID=Dca45903.1.exon6;Parent=Dca45903.1
scaffold5426	Augustus	exon	32400	32489	.	+	.	ID=Dca45903.1.exon7;Parent=Dca45903.1