Carnation DB

Dca45917.1

Annotation

14-exons
f-1
sp|D7U300_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g03380#GO:0005744;GO:0015450;GO:0006886#1F1P1C
sp|B9SF39_RICCO#Mitochondrial import inner membrane translocase subunit tim44, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1213600#GO:0005744;GO:0015450;GO:0006886#1F1P1C
Repeat List (scaffold543)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45917.1	1	492	492	64.83	492	65	3e-180
Target_name	Start	End	Length	Cov(%)
sp\|D7U300_VITVI	1	484	484	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45917.1	1	492	492	59.14	492	59	4e-167
Target_name	Start	End	Length	Cov(%)
AT2G36070.1	1	469	469	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold543	Augus-PASA	mRNA	37191	42860	.	+	.	ID=Dca45917.1;Parent=Dca45917
scaffold543	Augus-PASA	exon	37191	37259	.	+	.	ID=Dca45917.1.exon1;Parent=Dca45917.1
scaffold543	Augus-PASA	exon	37377	37489	.	+	.	ID=Dca45917.1.exon2;Parent=Dca45917.1
scaffold543	Augus-PASA	exon	38206	38289	.	+	.	ID=Dca45917.1.exon3;Parent=Dca45917.1
scaffold543	Augus-PASA	exon	38405	38480	.	+	.	ID=Dca45917.1.exon4;Parent=Dca45917.1
scaffold543	Augustus	exon	39229	39273	.	+	.	ID=Dca45917.1.exon5;Parent=Dca45917.1
scaffold543	Augustus	exon	39354	39797	.	+	.	ID=Dca45917.1.exon6;Parent=Dca45917.1
scaffold543	Augus-PASA	exon	39885	39953	.	+	.	ID=Dca45917.1.exon7;Parent=Dca45917.1
scaffold543	Augus-PASA	exon	40591	40655	.	+	.	ID=Dca45917.1.exon8;Parent=Dca45917.1
scaffold543	Augus-PASA	exon	40756	40824	.	+	.	ID=Dca45917.1.exon9;Parent=Dca45917.1
scaffold543	Augus-PASA	exon	40906	40978	.	+	.	ID=Dca45917.1.exon10;Parent=Dca45917.1
scaffold543	Augus-PASA	exon	41088	41192	.	+	.	ID=Dca45917.1.exon11;Parent=Dca45917.1
scaffold543	Augus-PASA	exon	41827	41898	.	+	.	ID=Dca45917.1.exon12;Parent=Dca45917.1
scaffold543	Augus-PASA	exon	41985	42047	.	+	.	ID=Dca45917.1.exon13;Parent=Dca45917.1
scaffold543	Augus-PASA	exon	42729	42860	.	+	.	ID=Dca45917.1.exon14;Parent=Dca45917.1