Dca460.1
Annotation
- 3-exons
- f-1
- sp|B9HW70_POPTR#Aquaporin, MIP family, NIP subfamily#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_566501#GO:0016021;GO:0005215;GO:0055085;GO:0006833#1F2P1C
- Repeat List (scaffold10079)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca460.1 |
2 |
153 |
153 |
71.24 |
152 |
72 |
2e-58
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HW70_POPTR |
46 |
196 |
263 |
57.41 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca460.1 |
2 |
153 |
153 |
69.28 |
152 |
70 |
1e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G37810.1 |
55 |
206 |
283 |
53.71 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10079 |
Augustus |
mRNA |
3032 |
5200 |
. |
+ |
. |
ID=Dca460.1;Parent=Dca460 |
| scaffold10079 |
Augustus |
exon |
3032 |
3229 |
. |
+ |
. |
ID=Dca460.1.exon1;Parent=Dca460.1 |
| scaffold10079 |
Augustus |
exon |
4616 |
4813 |
. |
+ |
. |
ID=Dca460.1.exon2;Parent=Dca460.1 |
| scaffold10079 |
Augustus |
exon |
5135 |
5200 |
. |
+ |
. |
ID=Dca460.1.exon3;Parent=Dca460.1 |
