Dca4623.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold11735)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4623.1 |
1 |
337 |
337 |
61.42 |
337 |
59 |
6e-106
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
374 |
700 |
1717 |
19.04 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4623.1 |
156 |
231 |
337 |
8.01 |
76 |
36 |
2e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
115 |
189 |
192 |
39.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11735 |
Augustus |
mRNA |
3790 |
6377 |
. |
+ |
. |
ID=Dca4623.1;Parent=Dca4623 |
| scaffold11735 |
Augustus |
exon |
3790 |
4071 |
. |
+ |
. |
ID=Dca4623.1.exon1;Parent=Dca4623.1 |
| scaffold11735 |
Augustus |
exon |
4136 |
4170 |
. |
+ |
. |
ID=Dca4623.1.exon2;Parent=Dca4623.1 |
| scaffold11735 |
Augustus |
exon |
5568 |
5718 |
. |
+ |
. |
ID=Dca4623.1.exon3;Parent=Dca4623.1 |
| scaffold11735 |
Augustus |
exon |
5832 |
6377 |
. |
+ |
. |
ID=Dca4623.1.exon4;Parent=Dca4623.1 |
