Carnation DB

Dca46238.1

Annotation

6-exons
f-1
sp|G7IIN9_MEDTR#U6 snRNA-associated Sm-like protein LSm1#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_2g042700#unknown#0F0P0C
Repeat List (scaffold55)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46238.1	72	155	155	44.51	84	83	2e-36
Target_name	Start	End	Length	Cov(%)
sp\|G7IIN9_MEDTR	45	128	128	65.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46238.1	72	155	155	43.22	84	80	1e-34
Target_name	Start	End	Length	Cov(%)
AT3G14080.1	45	128	128	65.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold55	Augus-PASA	mRNA	250218	254822	.	-	.	ID=Dca46238.1;Parent=Dca46238
scaffold55	Augus-PASA	exon	250218	250295	.	-	.	ID=Dca46238.1.exon1;Parent=Dca46238.1
scaffold55	Augus-PASA	exon	250424	250486	.	-	.	ID=Dca46238.1.exon2;Parent=Dca46238.1
scaffold55	Augus-PASA	exon	250587	250702	.	-	.	ID=Dca46238.1.exon3;Parent=Dca46238.1
scaffold55	Augustus	exon	253724	253812	.	-	.	ID=Dca46238.1.exon4;Parent=Dca46238.1
scaffold55	Augustus	exon	253975	254074	.	-	.	ID=Dca46238.1.exon5;Parent=Dca46238.1
scaffold55	Augustus	exon	254801	254822	.	-	.	ID=Dca46238.1.exon6;Parent=Dca46238.1