Carnation DB

Dca46272.1

Annotation

8-exons
f-1
sp|D7M015_ARALL#Predicted protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_661912#GO:0016459;GO:0003779;GO:0005524;GO:0003774#3F0P1C
AT5G20490.1 | Symbols: XIK, ATXIK, XI-17 | Myosin family protein with Dil domain | chr5:6927064-6936825 REVERSE LENGTH=1545
Repeat List (scaffold550)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46272.1	20	374	378	47.08	355	48	6e-82
Target_name	Start	End	Length	Cov(%)
sp\|D7M015_ARALL	982	1317	1539	21.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46272.1	20	374	378	46.82	355	48	8e-83
Target_name	Start	End	Length	Cov(%)
AT5G20490.1	983	1318	1545	21.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold550	Augustus	mRNA	168471	172908	.	+	.	ID=Dca46272.1;Parent=Dca46272
scaffold550	Augustus	exon	168471	168710	.	+	.	ID=Dca46272.1.exon1;Parent=Dca46272.1
scaffold550	Augustus	exon	168834	169007	.	+	.	ID=Dca46272.1.exon2;Parent=Dca46272.1
scaffold550	Augustus	exon	169114	169158	.	+	.	ID=Dca46272.1.exon3;Parent=Dca46272.1
scaffold550	Augustus	exon	169240	169305	.	+	.	ID=Dca46272.1.exon4;Parent=Dca46272.1
scaffold550	Augustus	exon	172000	172200	.	+	.	ID=Dca46272.1.exon5;Parent=Dca46272.1
scaffold550	Augustus	exon	172299	172454	.	+	.	ID=Dca46272.1.exon6;Parent=Dca46272.1
scaffold550	Augustus	exon	172540	172740	.	+	.	ID=Dca46272.1.exon7;Parent=Dca46272.1
scaffold550	Augustus	exon	172855	172908	.	+	.	ID=Dca46272.1.exon8;Parent=Dca46272.1