Dca4647.1
Annotation
- 3-exons
- f-1
- sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold11747)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4647.1 |
2 |
488 |
543 |
37.01 |
487 |
42 |
3e-115
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG1_BETVU |
485 |
972 |
1110 |
43.96 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4647.1 |
1 |
443 |
543 |
26.7 |
443 |
33 |
1e-58
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
394 |
843 |
857 |
52.5 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11747 |
Augustus |
mRNA |
4307 |
7020 |
. |
- |
. |
ID=Dca4647.1;Parent=Dca4647 |
| scaffold11747 |
Augustus |
exon |
4307 |
4432 |
. |
- |
. |
ID=Dca4647.1.exon1;Parent=Dca4647.1 |
| scaffold11747 |
Augustus |
exon |
4572 |
4623 |
. |
- |
. |
ID=Dca4647.1.exon2;Parent=Dca4647.1 |
| scaffold11747 |
Augustus |
exon |
5567 |
7020 |
. |
- |
. |
ID=Dca4647.1.exon3;Parent=Dca4647.1 |
