Carnation DB

Dca46495.1

Annotation

7-exons
f-1
sp|F6HC74_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0067g03020#unknown#0F0P0C
AT5G05240.1 | Symbols: | Uncharacterised conserved protein (UCP030365) | chr5:1554023-1556230 REVERSE LENGTH=530
Repeat List (scaffold5556)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46495.1	9	593	593	48.22	585	46	1e-119
Target_name	Start	End	Length	Cov(%)
sp\|F6HC74_VITVI	4	603	603	99.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46495.1	167	592	593	29.84	426	40	1e-70
Target_name	Start	End	Length	Cov(%)
AT5G05240.1	117	529	530	77.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5556	Augustus	mRNA	18176	22284	.	+	.	ID=Dca46495.1;Parent=Dca46495
scaffold5556	Augustus	exon	18176	18232	.	+	.	ID=Dca46495.1.exon1;Parent=Dca46495.1
scaffold5556	Augustus	exon	18329	18428	.	+	.	ID=Dca46495.1.exon2;Parent=Dca46495.1
scaffold5556	Augustus	exon	18954	20066	.	+	.	ID=Dca46495.1.exon3;Parent=Dca46495.1
scaffold5556	Augustus	exon	20409	20471	.	+	.	ID=Dca46495.1.exon4;Parent=Dca46495.1
scaffold5556	Augustus	exon	20555	20775	.	+	.	ID=Dca46495.1.exon5;Parent=Dca46495.1
scaffold5556	Augustus	exon	21281	21399	.	+	.	ID=Dca46495.1.exon6;Parent=Dca46495.1
scaffold5556	Augustus	exon	22176	22284	.	+	.	ID=Dca46495.1.exon7;Parent=Dca46495.1