Carnation DB

Dca46557.1

Annotation

5-exons
f-1
sp|B9MTZ3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_796419#GO:0006857#0F1P0C
AT1G32450.1 | Symbols: NRT1.5 | nitrate transporter 1.5 | chr1:11715337-11719807 REVERSE LENGTH=614
Repeat List (scaffold5571)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46557.1	15	600	600	75.66	586	78	0
Target_name	Start	End	Length	Cov(%)
sp\|B9MTZ3_POPTR	6	591	591	99.15

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46557.1	1	597	600	71.83	597	72	0
Target_name	Start	End	Length	Cov(%)
AT1G32450.1	1	598	614	97.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5571	Augustus	mRNA	19777	25199	.	+	.	ID=Dca46557.1;Parent=Dca46557
scaffold5571	Augustus	exon	19777	19803	.	+	.	ID=Dca46557.1.exon1;Parent=Dca46557.1
scaffold5571	Augustus	exon	20064	20184	.	+	.	ID=Dca46557.1.exon2;Parent=Dca46557.1
scaffold5571	Augustus	exon	23365	23582	.	+	.	ID=Dca46557.1.exon3;Parent=Dca46557.1
scaffold5571	Augustus	exon	23678	24240	.	+	.	ID=Dca46557.1.exon4;Parent=Dca46557.1
scaffold5571	Augustus	exon	24326	25199	.	+	.	ID=Dca46557.1.exon5;Parent=Dca46557.1