Carnation DB

Dca4663.1

Annotation

8-exons
f-1
sp|B9N6N9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_828387#GO:0015035#1F0P0C
AT5G38900.1 | Symbols: | Thioredoxin superfamily protein | chr5:15573745-15574945 REVERSE LENGTH=217
Repeat List (scaffold1176)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4663.1	36	252	252	65.87	217	77	1e-100
Target_name	Start	End	Length	Cov(%)
sp\|B9N6N9_POPTR	1	217	217	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4663.1	36	251	252	59.12	216	69	3e-89
Target_name	Start	End	Length	Cov(%)
AT5G38900.1	1	216	217	99.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1176	Augustus	mRNA	5253	7975	.	+	.	ID=Dca4663.1;Parent=Dca4663
scaffold1176	Augustus	exon	5253	5342	.	+	.	ID=Dca4663.1.exon1;Parent=Dca4663.1
scaffold1176	Augustus	exon	6175	6333	.	+	.	ID=Dca4663.1.exon2;Parent=Dca4663.1
scaffold1176	Augustus	exon	6441	6560	.	+	.	ID=Dca4663.1.exon3;Parent=Dca4663.1
scaffold1176	Augustus	exon	6659	6702	.	+	.	ID=Dca4663.1.exon4;Parent=Dca4663.1
scaffold1176	Augustus	exon	6792	6917	.	+	.	ID=Dca4663.1.exon5;Parent=Dca4663.1
scaffold1176	Augustus	exon	7156	7240	.	+	.	ID=Dca4663.1.exon6;Parent=Dca4663.1
scaffold1176	Augustus	exon	7730	7786	.	+	.	ID=Dca4663.1.exon7;Parent=Dca4663.1
scaffold1176	Augustus	exon	7898	7975	.	+	.	ID=Dca4663.1.exon8;Parent=Dca4663.1