Carnation DB

Dca46870.1

Annotation

9-exons
f-1
sp|B9IF37_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_575282#GO:0004518;GO:0006281#1F1P0C
AT3G48425.1 | Symbols: | DNAse I-like superfamily protein | chr3:17931910-17934493 FORWARD LENGTH=364
Repeat List (scaffold564)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46870.1	3	366	370	75.4	364	77	4e-170
Target_name	Start	End	Length	Cov(%)
sp\|B9IF37_POPTR	1	366	366	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46870.1	3	370	370	71.62	368	72	3e-161
Target_name	Start	End	Length	Cov(%)
AT3G48425.1	1	364	364	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold564	Augus-PASA	mRNA	18325	22980	.	+	.	ID=Dca46870.1;Parent=Dca46870
scaffold564	Augus-PASA	exon	18325	18579	.	+	.	ID=Dca46870.1.exon1;Parent=Dca46870.1
scaffold564	Augus-PASA	exon	19537	19629	.	+	.	ID=Dca46870.1.exon2;Parent=Dca46870.1
scaffold564	Augus-PASA	exon	20264	20408	.	+	.	ID=Dca46870.1.exon3;Parent=Dca46870.1
scaffold564	Augus-PASA	exon	21225	21426	.	+	.	ID=Dca46870.1.exon4;Parent=Dca46870.1
scaffold564	Augus-PASA	exon	21785	21863	.	+	.	ID=Dca46870.1.exon5;Parent=Dca46870.1
scaffold564	Augus-PASA	exon	22067	22128	.	+	.	ID=Dca46870.1.exon6;Parent=Dca46870.1
scaffold564	Augus-PASA	exon	22361	22447	.	+	.	ID=Dca46870.1.exon7;Parent=Dca46870.1
scaffold564	Augus-PASA	exon	22553	22656	.	+	.	ID=Dca46870.1.exon8;Parent=Dca46870.1
scaffold564	Augus-PASA	exon	22895	22980	.	+	.	ID=Dca46870.1.exon9;Parent=Dca46870.1