Carnation DB

Dca46916.1

Annotation

8-exons
f-1
sp|D7TVD2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0025g01180#GO:0016021;GO:0005743;GO:0005488;GO:0055085#1F1P2C
sp|B9T344_RICCO#Grave disease carrier protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0149870#GO:0016021;GO:0005743;GO:0005488;GO:0055085#1F1P2C
Repeat List (scaffold565)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46916.1	1	354	354	86.72	354	87	2e-180
Target_name	Start	End	Length	Cov(%)
sp\|D7TVD2_VITVI	1	354	354	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46916.1	1	354	354	81.35	354	81	1e-171
Target_name	Start	End	Length	Cov(%)
Os05t0585900-01	1	355	356	99.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold565	Augustus	mRNA	26514	32337	.	+	.	ID=Dca46916.1;Parent=Dca46916
scaffold565	Augustus	exon	26514	26674	.	+	.	ID=Dca46916.1.exon1;Parent=Dca46916.1
scaffold565	Augustus	exon	28020	28068	.	+	.	ID=Dca46916.1.exon2;Parent=Dca46916.1
scaffold565	Augustus	exon	28736	28899	.	+	.	ID=Dca46916.1.exon3;Parent=Dca46916.1
scaffold565	Augustus	exon	30128	30165	.	+	.	ID=Dca46916.1.exon4;Parent=Dca46916.1
scaffold565	Augus-PASA	exon	30396	30508	.	+	.	ID=Dca46916.1.exon5;Parent=Dca46916.1
scaffold565	Augus-PASA	exon	30593	30706	.	+	.	ID=Dca46916.1.exon6;Parent=Dca46916.1
scaffold565	Augus-PASA	exon	31248	31589	.	+	.	ID=Dca46916.1.exon7;Parent=Dca46916.1
scaffold565	Augus-PASA	exon	32254	32337	.	+	.	ID=Dca46916.1.exon8;Parent=Dca46916.1