Carnation DB

Dca46919.1

Annotation

7-exons
f-1
sp|B9RCP1_RICCO#Ubiquitin ligase protein cop1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1691060#GO:0032440;GO:0005524;GO:0016874;GO:0004672#4F0P0C
Repeat List (scaffold565)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46919.1	1	991	991	52.67	991	50	0
Target_name	Start	End	Length	Cov(%)
sp\|B9RCP1_RICCO	1	1044	1044	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46919.1	7	991	991	48.33	985	46	0
Target_name	Start	End	Length	Cov(%)
AT4G11110.1	4	1036	1036	99.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold565	Augustus	mRNA	60598	65579	.	+	.	ID=Dca46919.1;Parent=Dca46919
scaffold565	Augustus	exon	60598	61905	.	+	.	ID=Dca46919.1.exon1;Parent=Dca46919.1
scaffold565	Augustus	exon	62157	62314	.	+	.	ID=Dca46919.1.exon2;Parent=Dca46919.1
scaffold565	Augustus	exon	63047	63839	.	+	.	ID=Dca46919.1.exon3;Parent=Dca46919.1
scaffold565	Augustus	exon	64017	64163	.	+	.	ID=Dca46919.1.exon4;Parent=Dca46919.1
scaffold565	Augustus	exon	64452	64769	.	+	.	ID=Dca46919.1.exon5;Parent=Dca46919.1
scaffold565	Augustus	exon	64885	64944	.	+	.	ID=Dca46919.1.exon6;Parent=Dca46919.1
scaffold565	Augustus	exon	65388	65579	.	+	.	ID=Dca46919.1.exon7;Parent=Dca46919.1