Carnation DB

Dca46925.1

Annotation

7-exons
f-1
sp|C6T7Y2_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0008270#1F0P0C
sp|G7JDP3_MEDTR#E3 ubiquitin-protein ligase#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_4g065670#GO:0016874;GO:0008270#2F0P0C
Repeat List (scaffold5650)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46925.1	1	267	270	51.48	267	52	7e-70
Target_name	Start	End	Length	Cov(%)
sp\|C6T7Y2_SOYBN	1	246	248	99.19

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46925.1	1	268	270	42.22	268	43	2e-52
Target_name	Start	End	Length	Cov(%)
Os03t0173900-01	1	249	251	99.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5650	Augustus	mRNA	7205	9821	.	+	.	ID=Dca46925.1;Parent=Dca46925
scaffold5650	Augustus	exon	7205	7345	.	+	.	ID=Dca46925.1.exon1;Parent=Dca46925.1
scaffold5650	Augustus	exon	7500	7803	.	+	.	ID=Dca46925.1.exon2;Parent=Dca46925.1
scaffold5650	Augustus	exon	8599	8630	.	+	.	ID=Dca46925.1.exon3;Parent=Dca46925.1
scaffold5650	Augustus	exon	8981	9025	.	+	.	ID=Dca46925.1.exon4;Parent=Dca46925.1
scaffold5650	Augus-PASA	exon	9132	9256	.	+	.	ID=Dca46925.1.exon5;Parent=Dca46925.1
scaffold5650	Augus-PASA	exon	9555	9663	.	+	.	ID=Dca46925.1.exon6;Parent=Dca46925.1
scaffold5650	Augus-PASA	exon	9765	9821	.	+	.	ID=Dca46925.1.exon7;Parent=Dca46925.1