Dca46971.1
Annotation
- 3-exons
- f-88
- sp|Q2AA09_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=20.t00008#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold5662)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca46971.1 |
62 |
219 |
222 |
31.08 |
158 |
43 |
6e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA09_ASPOF |
6 |
166 |
275 |
58.54 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5662 |
Augustus |
mRNA |
2930 |
4189 |
. |
+ |
. |
ID=Dca46971.1;Parent=Dca46971 |
| scaffold5662 |
Augustus |
exon |
2930 |
3085 |
. |
+ |
. |
ID=Dca46971.1.exon1;Parent=Dca46971.1 |
| scaffold5662 |
Augustus |
exon |
3360 |
3412 |
. |
+ |
. |
ID=Dca46971.1.exon2;Parent=Dca46971.1 |
| scaffold5662 |
Augustus |
exon |
3730 |
4189 |
. |
+ |
. |
ID=Dca46971.1.exon3;Parent=Dca46971.1 |
