Dca47039.1
Annotation
- 4-exons
- f-1
- sp|F6HZQ2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g04190#GO:0005694;GO:0005634;GO:0018024;GO:0008270#2F0P2C
- sp|B9SKN2_RICCO#Set domain protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0542660#GO:0005694;GO:0005634;GO:0018024;GO:0008270#2F0P2C
- Repeat List (scaffold568)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47039.1 |
8 |
329 |
339 |
41.59 |
322 |
35 |
2e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HZQ2_VITVI |
6 |
392 |
848 |
45.63 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47039.1 |
1 |
329 |
339 |
31.26 |
329 |
31 |
2e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G43990.2 |
24 |
333 |
740 |
41.89 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold568 |
Augustus |
mRNA |
45851 |
48111 |
. |
- |
. |
ID=Dca47039.1;Parent=Dca47039 |
| scaffold568 |
Augustus |
exon |
45851 |
46227 |
. |
- |
. |
ID=Dca47039.1.exon1;Parent=Dca47039.1 |
| scaffold568 |
Augustus |
exon |
47102 |
47516 |
. |
- |
. |
ID=Dca47039.1.exon2;Parent=Dca47039.1 |
| scaffold568 |
Augustus |
exon |
47599 |
47637 |
. |
- |
. |
ID=Dca47039.1.exon3;Parent=Dca47039.1 |
| scaffold568 |
Augustus |
exon |
47923 |
48111 |
. |
- |
. |
ID=Dca47039.1.exon4;Parent=Dca47039.1 |
