Carnation DB

Dca47123.1

Annotation

5-exons
f-1
sp|B9S5M2_RICCO#Pre-mRNA-splicing factor syf2, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0979410#unknown#0F0P0C
Repeat List (scaffold57)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47123.1	1	304	304	76.64	304	76	6e-131
Target_name	Start	End	Length	Cov(%)
sp\|B9S5M2_RICCO	1	308	308	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47123.1	1	304	304	72.69	304	72	1e-123
Target_name	Start	End	Length	Cov(%)
AT2G16860.1	1	298	298	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold57	Augustus	mRNA	56184	59205	.	-	.	ID=Dca47123.1;Parent=Dca47123
scaffold57	Augustus	exon	56184	56411	.	-	.	ID=Dca47123.1.exon1;Parent=Dca47123.1
scaffold57	Augus-PASA	exon	56509	56645	.	-	.	ID=Dca47123.1.exon2;Parent=Dca47123.1
scaffold57	Augus-PASA	exon	57260	57500	.	-	.	ID=Dca47123.1.exon3;Parent=Dca47123.1
scaffold57	Augus-PASA	exon	57630	57814	.	-	.	ID=Dca47123.1.exon4;Parent=Dca47123.1
scaffold57	Augustus	exon	59082	59205	.	-	.	ID=Dca47123.1.exon5;Parent=Dca47123.1