Carnation DB

Dca47136.1

Annotation

9-exons
f-1
sp|B9HR21_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1086398#GO:0016021;GO:0055085#0F1P1C
sp|B9R8F8_RICCO#Tetracycline transporter, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1599560#GO:0016021;GO:0055085#0F1P1C
Repeat List (scaffold57)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47136.1	3	267	281	48.04	265	41	1e-61
Target_name	Start	End	Length	Cov(%)
sp\|B9HR21_POPTR	101	429	442	74.43

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47136.1	2	273	281	40.92	272	33	3e-45
Target_name	Start	End	Length	Cov(%)
AT2G16980.2	103	450	461	75.48

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold57	Augustus	mRNA	162409	165153	.	+	.	ID=Dca47136.1;Parent=Dca47136
scaffold57	Augustus	exon	162409	162504	.	+	.	ID=Dca47136.1.exon1;Parent=Dca47136.1
scaffold57	Augustus	exon	163094	163216	.	+	.	ID=Dca47136.1.exon2;Parent=Dca47136.1
scaffold57	Augustus	exon	163297	163481	.	+	.	ID=Dca47136.1.exon3;Parent=Dca47136.1
scaffold57	Augustus	exon	163569	163641	.	+	.	ID=Dca47136.1.exon4;Parent=Dca47136.1
scaffold57	Augustus	exon	163813	163899	.	+	.	ID=Dca47136.1.exon5;Parent=Dca47136.1
scaffold57	Augustus	exon	164448	164489	.	+	.	ID=Dca47136.1.exon6;Parent=Dca47136.1
scaffold57	Augustus	exon	164617	164695	.	+	.	ID=Dca47136.1.exon7;Parent=Dca47136.1
scaffold57	Augustus	exon	164874	164944	.	+	.	ID=Dca47136.1.exon8;Parent=Dca47136.1
scaffold57	Augustus	exon	165064	165153	.	+	.	ID=Dca47136.1.exon9;Parent=Dca47136.1