Carnation DB

Dca47232.1

Annotation

7-exons
f-1
sp|D7SKC8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g05030#GO:0016021;GO:0005524;GO:0004222;GO:0017111;GO:0008270;GO:0030163;GO:0006508#4F2P1C
Os05t0458400-01 Similar to AAA-metalloprotease FtsH.
Repeat List (scaffold572)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47232.1	559	1023	1026	32.45	465	72	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SKC8_VITVI	310	775	820	56.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47232.1	559	1023	1026	31.96	465	71	0
Target_name	Start	End	Length	Cov(%)
Os05t0458400-01	313	778	823	56.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold572	Augustus	mRNA	2644	7117	.	+	.	ID=Dca47232.1;Parent=Dca47232
scaffold572	Augustus	exon	2644	2889	.	+	.	ID=Dca47232.1.exon1;Parent=Dca47232.1
scaffold572	Augustus	exon	2977	3752	.	+	.	ID=Dca47232.1.exon2;Parent=Dca47232.1
scaffold572	Augustus	exon	3918	4152	.	+	.	ID=Dca47232.1.exon3;Parent=Dca47232.1
scaffold572	Augustus	exon	4238	4549	.	+	.	ID=Dca47232.1.exon4;Parent=Dca47232.1
scaffold572	Augustus	exon	5248	5403	.	+	.	ID=Dca47232.1.exon5;Parent=Dca47232.1
scaffold572	Augustus	exon	5678	6676	.	+	.	ID=Dca47232.1.exon6;Parent=Dca47232.1
scaffold572	Augustus	exon	6761	7117	.	+	.	ID=Dca47232.1.exon7;Parent=Dca47232.1