Dca47271.1
Annotation
- 2-exons
- f-1
- sp|Q6L3S2_SOLDE#Putative retrotransposon protein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_41t00017#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold573)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47271.1 |
1 |
95 |
151 |
32.45 |
95 |
49 |
9e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3S2_SOLDE |
1336 |
1431 |
1602 |
5.99 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold573 |
Augustus |
mRNA |
42840 |
43413 |
. |
+ |
. |
ID=Dca47271.1;Parent=Dca47271 |
| scaffold573 |
Augustus |
exon |
42840 |
43002 |
. |
+ |
. |
ID=Dca47271.1.exon1;Parent=Dca47271.1 |
| scaffold573 |
Augustus |
exon |
43121 |
43413 |
. |
+ |
. |
ID=Dca47271.1.exon2;Parent=Dca47271.1 |
